Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924300.1_cds_XP_016472660.1_64882
CDS Infomation

[gene=LOC107794660] [db_xref=GeneID:107794660] [protein=pentatricopeptide repeat-containing protein At1g05600] [protein_id=XP_016472660.1] [location=join(151199..152537,152577..152734)] [gbkey=CDS]
Sequence

ATGGGCATAAGATGGCCAAGGGTTTTAACGCCGAAGCAGCTCTCACAGATAATACAGAGC
CAGAAGAACCCACTAAAAGCGCTTCAACTCTTTGACGAAGCAAAATTCAAGTATCCAACT
TACCATCATAATGGTCCTGCCTATGGCACTATGATTAATATTTTAGGCAGATCAGGTAGA
ACAGCTGAAATGAAGAGAGTAATTAATCAGATGAAAGATGACTCATGTGAGTGTCATGAC
TCAATATTTGTCAGTGCCATTAGTAGTTACGCACAAGCTGGATTAACAAATGAAGCCATG
TCTCTTTTTAAGTCTCTTCCGGAGTTCAATTGTATAGATTGGACAAGATCTTTGAATACG
CTTTTGGAGATATTGGTAGAAGAATCTAAGCTAGAATCAGTTTGTCAGTTATTCCTTGAG
AACTCTTGTAGATGGGAAGTGAAGTCTCGGGCCTATTTCTTAAATTTGTTGATGAATGTT
CTTTGTAGAATGAAACGGTCAGACCTTGCATTGCATATTTTCCAAGAGATGAGTTACCAG
AACTGCTATCCAAACAAAGAGAGTTATAGGATCTTGATGAGGGGTCTGTGTGAAGAAAAG
CGGCTCAATGAGGCTACTCATCTGTTGTACTCAATGTTCTGGAGGATATCTCAGAAGGGT
AGTGGTGAAGATGTTGTTGTATATCGGACTCTATTGGAAGCGTTATGCGACAATGAAGAA
GGGGAGGAAGCCATTAGTATTCTCGGCAAGGTACTGCGGAAAGGACTTAAAGCTCCGAAA
AGATGCTATAAGCAGATTGATCATTTTCGATGCCAAAATGGTGCAGATACAGAAGATATG
AAAGTGTTGATTAATGAAGCTCTGATAAGAGGCATAGTTCCCAGTTCAGATAGCTACAGT
GCAATGGCCGTTGACTTTTACGCTGAAGGAAAGATTGATGAAGGTAACAAGGTTCTGAAG
GAAATGCATCACAGAGGCTTCAAACCATCGGTGTGGATTTATGAAGCTAAGGTATCTGCA
TTGTGTCGTGATGGCCAGGTTGATGAGGCAGTTGCGGTCATTGATTCTGAGATGATGCAG
AAAAACTGTGTTCCAAATATTAAGTTGTATAATGGTGTTATAAAAGGCCTATGCCATGAA
AGAAAATCTACTTCAGCTGTTAAGTATTTGGAAAGGATGTCTAGGCAAGTAGGATGCGCG
CCAAACTATGAGACTTATGAAACTTTGGTAGATGGGTTTTGTAAAGATGGTAAATATGTT
GAAGCAAGTAAGATATTGGAGCAAATGTCAAGCAATTCCTTTTGGCTTAGAGTTGAGACT
TTGAATTCTCTTATCCAAGGTCTTTGCCAAGTAGGTGATTTACACACTGCAATAATGTGT
TTGGAGGACATGATCTCTCTAGCCTCGACTCCAAATATCCAGGTGTGGCAGTCATTACTA
GAGACAATCTGTTGTGAAAATTCTGGCATCGAAAAGCAGCTACAGACCTTATTATAG

Peptide Sequence

PEP ID

XP_016472660.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g05600 [Nicotiana tabacum]
Sequence

MGIRWPRVLTPKQLSQIIQSQKNPLKALQLFDEAKFKYPTYHHNGPAYGTMINILGRSGR
TAEMKRVINQMKDDSCECHDSIFVSAISSYAQAGLTNEAMSLFKSLPEFNCIDWTRSLNT
LLEILVEESKLESVCQLFLENSCRWEVKSRAYFLNLLMNVLCRMKRSDLALHIFQEMSYQ
NCYPNKESYRILMRGLCEEKRLNEATHLLYSMFWRISQKGSGEDVVVYRTLLEALCDNEE
GEEAISILGKVLRKGLKAPKRCYKQIDHFRCQNGADTEDMKVLINEALIRGIVPSSDSYS
AMAVDFYAEGKIDEGNKVLKEMHHRGFKPSVWIYEAKVSALCRDGQVDEAVAVIDSEMMQ
KNCVPNIKLYNGVIKGLCHERKSTSAVKYLERMSRQVGCAPNYETYETLVDGFCKDGKYV
EASKILEQMSSNSFWLRVETLNSLIQGLCQVGDLHTAIMCLEDMISLASTPNIQVWQSLL
ETICCENSGIEKQLQTLL

Transcript Sequence

Gene sequence data has not been registered.